Application

For end users: The Application section describes how to use GENTRAIN in everyday professional life. It covers the import and management of case data, the analysis of outbreaks, and the visualization of genetic relationships in the dashboard.

Development

For developers: The Development section documents the application's architecture, data management patterns, genomic operations, deployment and CI guidance, plus security & testing best practices to help you extend and run GENTRAIN.

Administration

For administrators: The Administration section documents user and role management, pathogen and schema configuration, operational settings and deployment guidance to run and maintain GENTRAIN in production.